An improved subsea manifold system that is capable of being used in an early production system for producing hydrocarbons from a plurality of wells from a common riser system. The subsea manifold is able to control the fluid from a multiple of subsea wet-tree wells while at the same time giving the operator the option to isolate production from a single subsea well for production evaluation. The subsea manifold also includes a pigging loop which enables efficient pigging of the flowline(s) of the early production system.