Methods and apparatus for tracking manual operations during automatic control of a surface-engaging operation, such as laying a mat on a paving surface, include automatically operating a plurality of components to perform the surface-engaging operation without the actuation of corresponding operator controls. Actuation of the operator controls and actuation of the corresponding components to perform a manual operation can occur during the automatic operation. Information corresponding to the manual operation is recorded in response to detecting actuation of the operator controls and determining that the automatic operation of the machine is occurring.